Log File contents

(view as text)
./build_avida
 in dir /home/buildslave/avida/avida-dev-alice/build (timeout 1200 secs)
 watching logfiles {}
 argv: ['./build_avida']
 environment:
  CVS_RSH=ssh
  G_BROKEN_FILENAMES=1
  HISTSIZE=1000
  HOME=/home/buildslave
  HOSTNAME=alice.cme.msu.edu
  INPUTRC=/etc/inputrc
  KDEDIR=/usr
  KDE_IS_PRELINKED=1
  KDE_NO_IPV6=1
  LANG=en_US.UTF-8
  LESSOPEN=|/usr/bin/lesspipe.sh %s
  LOGNAME=buildslave
  LS_COLORS=no=00:fi=00:di=01;34:ln=01;36:pi=40;33:so=01;35:bd=40;33;01:cd=40;33;01:or=01;05;37;41:mi=01;05;37;41:ex=01;32:*.cmd=01;32:*.exe=01;32:*.com=01;32:*.btm=01;32:*.bat=01;32:*.sh=01;32:*.csh=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.gz=01;31:*.bz2=01;31:*.bz=01;31:*.tz=01;31:*.rpm=01;31:*.cpio=01;31:*.jpg=01;35:*.gif=01;35:*.bmp=01;35:*.xbm=01;35:*.xpm=01;35:*.png=01;35:*.tif=01;35:
  MAIL=/var/spool/mail/root
  PATH=/usr/local/bin:/usr/lib/qt-3.3/bin:/usr/kerberos/sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin:/root/bin
  PWD=/root
  QTDIR=/usr/lib/qt-3.3
  QTINC=/usr/lib/qt-3.3/include
  QTLIB=/usr/lib/qt-3.3/lib
  SHELL=/bin/bash
  SHLVL=2
  SSH_ASKPASS=/usr/libexec/openssh/gnome-ssh-askpass
  SSH_CLIENT=35.9.42.204 50531 22
  SSH_CONNECTION=35.9.42.204 50531 35.8.164.83 22
  SSH_TTY=/dev/pts/15
  TERM=xterm-color
  USER=buildslave
  _=/usr/bin/buildbot
 closing stdin
 using PTY: True
-- Configuring done
-- Generating done
-- Build files have been written to: /home/buildslave/avida/avida-dev-alice/build/cbuild
[  9%] [35m[1mScanning dependencies of target avidacore
[0mBuilt target tcmalloc
[ 10%] [ 11%] [ 12%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/cActionLibrary.o
[ 12%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/DriverActions.o
[0m[ 13%] [ 13%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/LandscapeActions.o
[0m[0m[32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/EnvironmentActions.o
[0m[ 14%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/PrintActions.o
[ 15%] [0m[32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/PopulationActions.o
[0m[32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cAnalyze.o
[0m[ 15%] [ 16%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/actions/SaveLoadActions.o
[32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cAnalyzeGenotype.o
[32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cAnalyzeTreeStats_CumulativeStemminess.o
[0m[0m[0m[ 17%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cAnalyzeTreeStats_Gamma.o
[0m/home/buildslave/avida/avida-dev-alice/build/source/actions/PopulationActions.cc: In member function ‘virtual void cAction_TherapyStructuralNumInst::Process(cAvidaContext&)’:
/home/buildslave/avida/avida-dev-alice/build/source/actions/PopulationActions.cc:1096: warning: passing ‘double’ for argument 1 to ‘void cIntSum::Add(long int, long int)’
/home/buildslave/avida/avida-dev-alice/build/source/actions/PopulationActions.cc: In member function ‘virtual void cAction_TherapyStructuralRatioDistBetweenNearest::Process(cAvidaContext&)’:
/home/buildslave/avida/avida-dev-alice/build/source/actions/PopulationActions.cc:1182: warning: converting to ‘int’ from ‘const double’
/home/buildslave/avida/avida-dev-alice/build/source/actions/PopulationActions.cc:1193: warning: passing ‘double’ for argument 1 to ‘void cIntSum::Add(long int, long int)’
[ 17%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cAnalyzeJobQueue.o
[0m[ 18%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/analyze/cGenotypeBatch.o
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[0m[ 22%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/classification/cInjectGenotype.o
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[0m[ 26%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/viewer-core/cCoreView_Map.o
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[0m[ 35%] [ 36%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/drivers/cDefaultAnalyzeDriver.o
[0m[32mBuilding CXX object CMakeFiles/avidacore.dir/source/drivers/cDefaultRunDriver.o
[0m[ 36%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/avida.o
[0m[ 37%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cAvidaConfig.o
[0m[ 38%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cBirthChamber.o
[0m[ 38%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cBirthDemeHandler.o
[0m[ 38%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cBirthGridLocalHandler.o
[0m[ 39%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cBirthMateSelectHandler.o
[0m[ 40%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cBirthNeighborhoodHandler.o
[0m[ 41%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cDeme.o
[0m[ 42%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cDemeNetwork.o
[0m[ 42%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cDemeTopologyNetwork.o
[0m[ 43%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cDemeCellEvent.o
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[0m[ 44%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cEventList.o
[0m[ 45%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cFitnessMatrix.o
[0m[ 46%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cGenomeUtil.o
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[0m[ 48%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cMutationRates.o
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[0m[ 51%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPhenotype.o
[0m[ 51%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPhenPlastGenotype.o
[0m[ 52%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPlasticPhenotype.o
[0m[ 53%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPopulation.o
[0m[ 53%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPopulationCell.o
[0m[ 54%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cPopulationInterface.o
[0m[ 55%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cResourceHistory.o
[0m[ 56%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cStats.o
[0m[ 56%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cTaskLib.o
[0m[ 57%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/main/cWorld.o
[0m[ 58%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cArgContainer.o
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[0m[ 59%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cBitArray.o
[0m[ 60%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cDataFileManager.o
[0m[ 61%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cDemeProbSchedule.o
[0m[ 62%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cHelpManager.o
[0m[ 63%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cInitFile.o
[0m[ 63%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cIntegratedSchedule.o
[0m[ 63%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cProbDemeProbSchedule.o
[0m[ 64%] [32mBuilding CXX object CMakeFiles/avidacore.dir/source/tools/cProbSchedule.o
[0m[31m[1mLinking CXX static library lib/libavidacore.a
[0m[100%] Built target avidacore
[35m[1mScanning dependencies of target avida
[0m[100%] [32mBuilding CXX object CMakeFiles/avida.dir/source/targets/avida/primitive.o
[0m[31m[1mLinking CXX executable bin/avida
[0m[100%] Built target avida
[  9%] Built target tcmalloc
[100%] Built target avidacore
[100%] Built target avida
[31m[1mLinking CXX executable CMakeFiles/CMakeRelink.dir/avida
[0m[36mInstall the project...
[0m-- Install configuration: "Release"
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/analyze.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/avida.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/environment.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/events.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/instset-gx.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/instset-heads.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/instset-heads-sex.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/instset-smt.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/instset-transsmt.cfg
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/default-gx.org
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/default-heads.org
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/default-heads-sex.org
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/default-smt.org
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/default-transsmt.org
-- Installing /home/buildslave/avida/avida-dev-alice/build/cbuild/work/avida
program finished with exit code 0